BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G06LP1|AL429623
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig869 1766 0.0
3x_Contig1503 222 9e-58
3x_Contig1263 222 9e-58
3x_Contig1624 206 6e-53
3x_Contig1722 204 2e-52
>3x_Contig869
Length = 2873
Score = 1766 bits (891), Expect = 0.0
Identities = 898/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Minus
Query: 3 ccatcaagaagtat-cgttacaagattgtcgcatcggtcttaacacagacatgtcgagat 61
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 ccatcaagaagtattcgttacaagattgtcgcatcggtcttaacacagacatgtcgagat 2246
Query: 62 gtcttagaataagatgcgagagggagcagttcctactgagagtgccagatgatgcatcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 gtcttagaataagatgcgagagggagcagttcctactgagagtgccagatgatgcatcag 2186
Query: 122 tgacatctttgttcgcaaagatcgcatgtgctgcggaacttgctgtcccaatggacagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 tgacatctttgttcgcaaagatcgcatgtgctgcggaacttgctgtcccaatggacagca 2126
Query: 182 agtcccatgacccgttgccgttgaaactgatgccctgggaagatgtaatgtgagagtaga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 agtcccatgacccgttgccgttgaaactgatgccctgggaagatgtaatgtgagagtaga 2066
Query: 242 ggcagtagtagtataatggataagctttgctcttgctattattagatggtgatgacgtgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 ggcagtagtagtataatggataagctttgctcttgctattattagatggtgatgacgtgg 2006
Query: 302 gaactaaaagaaatgggaagatgaaaacgaaaaaaaaagataagtctcccgggggcgagt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 gaactaaaagaaatgggaagatgaaaacgaaaaaaaaagataagtctcccgggggcgagt 1946
Query: 362 cgaacgcccgatctccagattacaaattgctttgtgttttcaaattacagtctggcgcct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 cgaacgcccgatctccagattacaaattgctttgtgttttcaaattacagtctggcgcct 1886
Query: 422 taaaccaacttggctaccgagaggaagcttgcgtgtggagcgatttcccagtcaactcgg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 taaaccaacttggctaccgagaggaagcttgcgtgtggagcgatttcccagtcaactcgg 1826
Query: 482 tgtgccgtgggtaccccgcgtaaataagcccatagaccctgtttagacttatttacctat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 tgtgccgtgggtaccccgcgtaaataagcccatagaccctgtttagacttatttacctat 1766
Query: 542 ttgcattaatgatagatgatacaagatactgtgagatatggattcatcacatactgaagg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 ttgcattaatgatagatgatacaagatactgtgagatatggattcatcacatactgaagg 1706
Query: 602 ttttgaattggtatcacgtgatttggatgtccagaatcaccaatgaggaaaaggaatatt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 ttttgaattggtatcacgtgatttggatgtccagaatcaccaatgaggaaaaggaatatt 1646
Query: 662 atgcaactccgtataaaggtttcaaagctttcccgggttccaagacaaggcatcgtgttt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 atgcaactccgtataaaggtttcaaagctttcccgggttccaagacaaggcatcgtgttt 1586
Query: 722 atctagaagtagtgaagtcagagtactagtttgacagatggatctactgcttaattagac 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 atctagaagtagtgaagtcagagtactagtttgacagatggatctactgcttaattagac 1526
Query: 782 aaatgaaactagcggggctaggaaattttattccgaacaaggacagtaactggtccacag 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 aaatgaaactagcggggctaggaaattttattccgaacaaggacagtaactggtccacag 1466
Query: 842 aaattctgtccggaatgggttaaacgaacatcatatagttcggaagatttttttaccac 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 aaattctgtccggaatgggttaaacgaacatcatatagttcggaagatttttttaccac 1407
>3x_Contig1503
Length = 10719
Score = 222 bits (112), Expect = 9e-58
Identities = 115/116 (99%)
Strand = Plus / Plus
Query: 331 aaaaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 390
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3477 aaaaaaaaaaataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 3536
Query: 391 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3537 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagga 3592
>3x_Contig1263
Length = 6840
Score = 222 bits (112), Expect = 9e-58
Identities = 112/112 (100%)
Strand = Plus / Minus
Query: 333 aaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgct 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5589 aaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgct 5530
Query: 393 ttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagag 444
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5529 ttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagag 5478
>3x_Contig1624
Length = 12551
Score = 206 bits (104), Expect = 6e-53
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 343 aagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5991 aagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttc 6050
Query: 403 aaattacagtctggcgccttaaaccaacttggctaccgagagga 446
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6051 aaattacagtctggcgccttaaaccaacttggctaccgagagga 6094
>3x_Contig1722
Length = 17718
Score = 204 bits (103), Expect = 2e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 343 aagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5675 aagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttgtgttttc 5734
Query: 403 aaattacagtctggcgccttaaaccaacttggctaccgagagg 445
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5735 aaattacagtctggcgccttaaaccaacttggctaccgagagg 5777
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6472
Number of Sequences: 1807
Number of extensions: 6472
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 5
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)